Configuration of the following bundled extensions failed, proceeding without them. If you really need them, please carefully read the following explanations, take the suggested actions, and repeat the configuration. ---- libnormaliz ---- Could not compile a test program checking for libnormaliz. The most probable reasons are that the library is installed at a non-standard location, is not configured to build a shared module, or missing at all. Also make sure that libnormaliz was built with the same C++ library as polymake,especially if the errors below show missing symbols containing std::__1::vector or std::vector.The complete error log follows: In file included from /tmp/polymake_19693_configure.cc:6: /usr/local/include/gmpxx.h:1704:42: warning: zero as null pointer constant [-Wzero-as-null-pointer-constant] __gmp_alloc_cstring temp(mpz_get_str(0, base, mp)); ^ nullptr /usr/local/include/gmpxx.h:1816:14: warning: zero as null pointer constant [-Wzero-as-null-pointer-constant] if (s == 0) ^ nullptr /usr/local/include/gmpxx.h:1887:42: warning: zero as null pointer constant [-Wzero-as-null-pointer-constant] __gmp_alloc_cstring temp(mpq_get_str(0, base, mp)); ^ nullptr /usr/local/include/gmpxx.h:2104:42: warning: zero as null pointer constant [-Wzero-as-null-pointer-constant] __gmp_alloc_cstring temp(mpf_get_str(0, &expo, base, size, mp)); ^ nullptr In file included from /tmp/polymake_19693_configure.cc:7: In file included from /usr/local/include/libnormaliz/libnormaliz.h:27: In file included from /usr/local/include/libnormaliz/general.h:144: /usr/local/include/libnormaliz/integer.h:400:16: warning: implicit conversion loses integer precision: 'std::__1::basic_istream >::int_type' (aka 'int') to 'char' [-Wimplicit-int-conversion] c = in.peek(); ~ ~~~^~~~~~ In file included from /tmp/polymake_19693_configure.cc:7: In file included from /usr/local/include/libnormaliz/libnormaliz.h:30: In file included from /usr/local/include/libnormaliz/automorph.h:31: In file included from /usr/local/include/libnormaliz/matrix.h:38: In file included from /usr/local/include/libnormaliz/vector_operations.h:39: In file included from /usr/local/include/flint/fmpq_poly.h:27: In file included from /usr/local/include/flint/fmpz_poly.h:35: /usr/local/include/flint/nmod_poly.h:406:16: warning: implicit conversion loses integer precision: 'size_t' (aka 'unsigned long') to 'int' [-Wshorten-64-to-32] return r; ~~~~~~ ^ In file included from /tmp/polymake_19693_configure.cc:7: In file included from /usr/local/include/libnormaliz/libnormaliz.h:30: In file included from /usr/local/include/libnormaliz/automorph.h:31: In file included from /usr/local/include/libnormaliz/matrix.h:38: /usr/local/include/libnormaliz/vector_operations.h:154:23: warning: implicit conversion loses integer precision: 'size_t' (aka 'unsigned long') to 'std::__1::__vector_base >::value_type' (aka 'int') [-Wshorten-64-to-32] inv_k[k[i]] = i; ~ ^ /usr/local/include/libnormaliz/vector_operations.h:508:17: warning: declaration shadows a local variable [-Wshadow] for (size_t i = 0; i < bv.size(); ++i) ^ /usr/local/include/libnormaliz/vector_operations.h:462:12: note: previous declaration is here size_t i, n = av.size(); ^ /usr/local/include/libnormaliz/vector_operations.h:979:18: warning: implicit conversion loses integer precision: 'size_t' (aka 'unsigned long') to 'std::__1::__vector_base >::value_type' (aka 'unsigned int') [-Wshorten-64-to-32] key[k] = k; ~ ^ /usr/local/include/libnormaliz/vector_operations.h:986:26: warning: implicit conversion loses integer precision: 'unsigned long' to 'std::__1::__vector_base >::value_type' (aka 'unsigned int') [-Wshorten-64-to-32] key[k] = (n - 1) - k; ~ ~~~~~~~~^~~ /usr/local/include/libnormaliz/vector_operations.h:1213:27: warning: implicit conversion loses integer precision: 'size_t' (aka 'unsigned long') to 'std::__1::vector >::value_type' (aka 'unsigned int') [-Wshorten-64-to-32] ret.push_back(i); ~~~~~~~~~ ^ In file included from /tmp/polymake_19693_configure.cc:7: In file included from /usr/local/include/libnormaliz/libnormaliz.h:31: In file included from /usr/local/include/libnormaliz/cone.h:36: /usr/local/include/libnormaliz/sublattice_representation.h:312:43: warning: declaration shadows a variable in namespace 'libnormaliz' [-Wshadow] bool verbose) { ^ /usr/local/include/libnormaliz/general.h:89:33: note: previous declaration is here NORMALIZ_DLL_EXPORT extern bool verbose; ^ 12 warnings generated. /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:function libnormaliz::kill_nauty(): error: undefined reference to 'nauty_kill_request' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:function libnormaliz::nauty_result libnormaliz::compute_automs_by_nauty_Gens_LF(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, unsigned long, libnormaliz::AutomParam::Quality): error: undefined reference to 'nauty_check' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:function libnormaliz::nauty_result libnormaliz::compute_automs_by_nauty_Gens_LF(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, unsigned long, libnormaliz::AutomParam::Quality): error: undefined reference to 'densenauty' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:function libnormaliz::nauty_result libnormaliz::compute_automs_by_nauty_Gens_LF(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, unsigned long, libnormaliz::AutomParam::Quality): error: undefined reference to 'nauty_freedyn' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:function libnormaliz::nauty_result libnormaliz::compute_automs_by_nauty_FromGensOnly(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, libnormaliz::AutomParam::Quality): error: undefined reference to 'nauty_check' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:function libnormaliz::nauty_result libnormaliz::compute_automs_by_nauty_FromGensOnly(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, libnormaliz::AutomParam::Quality): error: undefined reference to 'densenauty' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:function libnormaliz::nauty_result libnormaliz::compute_automs_by_nauty_FromGensOnly(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, libnormaliz::AutomParam::Quality): error: undefined reference to 'nauty_freedyn' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:function libnormaliz::nauty_result libnormaliz::compute_automs_by_nauty_Gens_LF(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, unsigned long, libnormaliz::AutomParam::Quality): error: undefined reference to 'nauty_check' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:function libnormaliz::nauty_result libnormaliz::compute_automs_by_nauty_Gens_LF(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, unsigned long, libnormaliz::AutomParam::Quality): error: undefined reference to 'densenauty' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:function libnormaliz::nauty_result libnormaliz::compute_automs_by_nauty_Gens_LF(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, unsigned long, libnormaliz::AutomParam::Quality): error: undefined reference to 'nauty_freedyn' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:function libnormaliz::nauty_result libnormaliz::compute_automs_by_nauty_FromGensOnly(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, libnormaliz::AutomParam::Quality): error: undefined reference to 'nauty_check' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:function libnormaliz::nauty_result libnormaliz::compute_automs_by_nauty_FromGensOnly(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, libnormaliz::AutomParam::Quality): error: undefined reference to 'densenauty' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:function libnormaliz::nauty_result libnormaliz::compute_automs_by_nauty_FromGensOnly(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, libnormaliz::AutomParam::Quality): error: undefined reference to 'nauty_freedyn' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:libnormaliz::compute_automs_by_nauty_Gens_LF(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, unsigned long, libnormaliz::AutomParam::Quality)::options: error: undefined reference to 'dispatch_graph' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:libnormaliz::compute_automs_by_nauty_FromGensOnly(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, libnormaliz::AutomParam::Quality)::options: error: undefined reference to 'dispatch_graph' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:libnormaliz::compute_automs_by_nauty_Gens_LF(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, unsigned long, libnormaliz::AutomParam::Quality)::options: error: undefined reference to 'dispatch_graph' /usr/local/lib/libnormaliz.a(nmz_nauty.o):nmz_nauty.cpp:libnormaliz::compute_automs_by_nauty_FromGensOnly(libnormaliz::Matrix const&, unsigned long, libnormaliz::Matrix const&, libnormaliz::AutomParam::Quality)::options: error: undefined reference to 'dispatch_graph' c++: error: linker command failed with exit code 1 (use -v to see invocation) Please install the library and specify its location using --with-libnormaliz option, if needed.